Matrices of tropical infection

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Virus
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COVID-19
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Bacteria
Bacteriological tests Tuberculosis Tuberculosis in Children HIV-TB co-infection Leprosy Dermatological mycobacterium infecions Syphilis and Yaws Plague Pneumococcus Meningococcus Typhoid Salmonellosis Melioidosis Leptospirosis Brucellosis Bartonellosis Lyme disease and Relapsing fever Tularaemia Tetanus Diphtheria Anthrax Coxiellosis

Rickettsia
Rickettsiosis Scrub typhus Spotted fevers Epidemic typhus Murine typhus

Protozoa
Overview of protozoa Overview of medicine for protozoa Malaria Chagas disease African trypanosomiasis Leishmaniasis Trichomoniasis Toxoplasmosis Amoebiasis Giardiasis Cryptosporidiosis Cyclosporiasis Isosporiasis Pentatrichomoniasis Microsporidiasis Babesiosis

Fungi
General issues of fungi Coccidioidomycosis Paracoccidioidomycosis Histoplasmosis Talaromycosis Blastomycosis Sporotrichosis

Nematode (roundworm)
Nematode principles Lympatic filariasis Onchocerciasis Loiasis Microscopic differentiation of microfilariae Strongyloidiasis Ascariasis Ancylostomiasis (hookworm) Trichuriasis (whipworm) Enterobiasis (pinworm) Angiostrongyliasis (rat lungworm) Dracunculiasis (Guinea worm) Anisakiasis Trichinellosis (Trichinosis) Gnathostomiasis Spirurinasis Soil-transmitted helminths

Trematode (fluke, distoma)
General issues of Helminths Trematode principles Schistosomiasis Clonorchiasis Fascioliasis Paragonimiasis Metagonimiasis

Cestode (tapeworm)
General issues of Helminths Cestode principles Diphyllobothriasis Sparganosis Taeniasis Echinococcosis

Medical Zoology
Zoonosis Insectology Mosquitology Acarology Batology Snake toxicology Scorpion and spider toxicology Marine toxicology

Routes of transmission

Water

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Direct contact to water	nil	Leptospirosis Melioidosis	Acanthamoeba spp. (cornea)	Schistosomiasis
Aspiration of water		Melioidosis	Naegleria fowleri
Ingestion of water		Melioidosis	Naegleria fowleri			Dracunculiasis (Guinea worm)

Animals

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Rodent	Hantavirus Lassa	Leptospirosis Plague
Domestic animals

Incubation period/Latent infection

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Incubation/latency possibly > 1 year		Melioidosis	Leishmania	Trypanosoma cruzi

Target organs

Eye involvement

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Conjunctivitis	Zika	Leptospirosis as conjunctival suffusion

Liver and spleen involvement

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Jaundice	Viral hepatitis Yellow fever	Leptospirosis	Malaria Visceral leishmaniasis
Hepatosplenomegaly		Melioidosis Brucellosis	Malaria Visceral leishmaniasis		Schistosomiasis
Hepatomegaly predominant	Viral hepatitis	Leptospirosis
Splenomegaly predominant

Infected cells

	Virus	Bacteria and Rickettsia	Protozoa	Nematode	Trematode	Cestode
Macrophage		Brucellosis Melioidosis	Trypanosomiasis Leishmaniasis